Managing Breeds for a Secure Future: Strategies for Breeders and Breed Associations

Managing Breeds for a Secure Future: Strategies for Breeders and Breed Associations

Managing Breeds for a Secure Future: Strategies for Breeders and Breed Associations

Managing Breeds for a Secure Future: Strategies for Breeders and Breed Associations

Hardcover(Third edition)

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Overview

Long-term management of rare breeds is a complicated endeavour, and strategies for success have been detailed in the first and second editions of Managing Breeds for a Secure Future. For many the challenge of knowing exactly what to do when very short-term actions are needed to rescue a numerically small population of animals remains. Such situations point to a need for a specific set of recipes that can be followed in different situations in order to assure successful outcomes. This new edition addresses that need. Each rare breed rescue comes with its own array of specific problems, but several general concepts run through all of them. These concepts provide a good framework for breed rescue work. This book relies on these concepts in order to help breeders chart a course when confronted with a rare population (breed or bloodline) that faces immediate threat of loss. Managing Breeds for a Secure Future Third Edition is an expanded version of the second edition. It is re-organized to flow better, and has additional chapters on specific breeding protocols for maintaining breeds. It also delves more deeply into rescuing rare populations, through both theory and practice.

Product Details

ISBN-13: 9781789181647
Publisher: 5m Publishing
Publication date: 02/20/2022
Edition description: Third edition
Pages: 420
Product dimensions: 6.75(w) x 9.50(h) x 1.20(d)

About the Author

D. Phillip Sponenberg, DVM, PhD, is Professor of Pathology and Genetics at the Virginia-Maryland Regional College of Veterinary Medicine located at Virginia Tech in Blacksburg, Virginia. He has worked worldwide on breed conservation. His goal is to achieve programs that function well in the cultural settings in which they serve.

Jeannette Beranger is Senior Program Manager for The Livestock Conservancy. Her fieldwork has been pivotal and inspirational to both new comers and old hands within the conservation community. Her extensive background in zookeeping has given her sharp observational skills, including an eye for breed type. Her photography has made an especially significant contribution to The Livestock Conservancy's educational efforts.

Alison Martin, PhD, is the Executive Director of The Livestock Conservancy. Her significant experience of both personnel management and the poultry industry combine to bring together people and science. The resulting combination achieves meaningful conservation of livestock and poultry genetic resources.

Charlene Couch, PhD, is a Senior Program Manager for The Livestock Conservancy. She grew up on a small farm in western North Carolina with horses, beef cattle, goats, and chickens. Her doctoral degree is in Zoology with a biotechnology minor. Charlene has a keen interest in conservation of genetic diversity in livestock. She currently keeps horses and Dominique chickens.

Table of Contents

Preface xi

1 Introduction 1

1.1 How to Use This Book 2

1.2 What Is a Breed? 4

1.3 Genetic Character of Breeds 6

1.4 Why Breeds Are Important 9

1.5 Sustaining Breeds over Time 12

2 Breed Basics 16

2.1 How Breeds Form 16

2.2 Classes of Breeds 18

2.2.1 Landraces 19

2.2.2 Standardized Breeds 24

2.2.3 Modern "Type" and "Designer" Breeds 28

2.2.4 Industrial Strains 29

2.2.5 Feral Populations 31

2.2.6 Dog Breeds 33

2.2.7 Poultry Breeds 34

2.2.8 Summary 34

2.3 How Breeds Are Lost 36

3 Breeds as Gene Pools: Variability and Predictability 39

3.1 Standardized Breeds 40

3.2 Landraces 43

3.3 Subgroups within a Breed: Bloodlines, Strains, and Varieties 46

3.4 Gene Flow into and out of Breeds 51

3.4.1 Upgrading and What It Does 53

3.4.2 Upgrading and Bloodlines 61

4 Defining an Individual Breed 64

4.1 Which Animals to Include 64

4.2 One Breed or Two 74

4.3 Breed Histories 77

4.4 Geography and Source Herds 78

4.5 Recovery of Purebred Animals into Registries 80

4.5.1 Native on Appearance 82

5 Breed Standards 84

5.1 Breed Type 84

5.2 Different Sorts of Breed Standards 87

5.3 Breed Type Reproduces Breed Type 92

5.4 Developing a Breed Standard 93

5.5 Breed Standards and Genetic Diversity 94

5.6 Breed Standards and Breed Loss 97

5.7 Standard Traits That Can Be Detrimental 98

5.8 Qualitative and Quantitative Traits 99

5.9 Changes to the Breed Standard 100

6 Principles of Genetic Management 102

6.1 Linebreeding and Inbreeding 103

6.2 Outcrossing: Crossbreeding and Linecrossing 107

6.3 Defining Matings as "Related" or "Unrelated" 109

6.4 Linebreeding or Outcrossing: Which Is Best? 112

6.5 Rational Crossbreeding 119

7 Selection as a Genetic Management Tool 122

7.1 Degree of Selection 125

7.2 Selection and Breed-Specific Traits 127

7.3 Genetic Drift 129

7.4 Single Gene Traits 130

7.5 Polygenic Traits 134

8 Evaluating Individual Animals 136

8.1 Competitive Shows 137

8.2 Card Grading 139

8.3 Non-Competitive Exhibition 141

8.4 Performance Testing 142

8.4.1 Adaptation 144

8.4.2 Temperament and Behavior 148

8.4.3 Longevity 150

8.4.4 Comprehensive Strategies 151

9 Practical Aspects of Genetic Management 153

9.1 Selection of Animals for Reproduction 153

9.2 Pairing of Animals within Purebred Breeds 154

9.3 Strategic Selection of Specific Mates 159

9.4 Strategic Use of Coefficients of Inbreeding 160

9.5 Use of Estimated Breeding Values 161

9.6 Breeding Goals for Various Sorts of Breeders 162

9.7 Poultry Breeds and Breeders 163

10 Assisted Reproduction Techniques 166

10.1 Artificial Insemination 166

10.2 Embryo Transfer 170

10.3 In Vitro Fertilization 171

10.4 Cloning 171

10.5 Cryopreservation 172

10.5.1 Selection of Samples and Numbers to Conserve 174

10.5.2 Sampling Standardized Breeds 176

10.5.3 Sampling Landraces 176

10.5.4 Sampling Feral Populations 177

11 Animal Identification 178

12 Population Analysis 183

12.1 Census 184

12.1.1 Numbers of Animals 185

12.1.2 Monitoring Bloodlines, Strains, and Families 189

12.1.3 Monitoring Health Issues 190

12.2 DNA Analysis 193

12.2.1 DNA: Microsatellites 194

12.2.2 DNA: Single Nucleotide Polymorphisms (SNPs) 201

12.2.3 DNA: Mitochondria 202

12.2.4 DNA: Y Chromosomes 203

12.2.5 Other Uses of DNA Technology 203

12.3 Pedigree-Based Analyses 206

12.3.1 Pedigree-Based Inbreeding Coefficients 206

12.3.2 Pedigree-Based Kinship Levels 207

12.3.3 Foundation Bloodline Analysis 207

12.3.4 Popular (or Rare) Sires (or Dams) 209

12.4 Summary 210

13 Maintaining Breeds for Long-Term Success 212

13.1 Genetic Bottlenecks 212

13.2 Monitoring Effective Population Size 214

13.3 Generation Interval 217

13.4 Inbreeding and Loss of Diversity 220

13.5 Monitoring Inbreeding 222

13.6 Inbreeding within Individual Herds 223

13.7 Inbreeding within Breeds 224

13.8 Combining Linebreeding and Linecrossing 227

13.9 Inbreeding and Linebreeding to Expand Rare Genetics 228

13.10 Managing Contributions of Individual Animals 230

14 Specific Plans for Maintenance Breeding 235

14.1 "Regular" Conservation Breeding 235

14.2 Variations on "Regular" Conservation Breeding 240

14.2.1 Strategies for Tracking Animals to Manage Bloodlines 241

14.2.2 Small Populations with Single Males 242

14.2.3 Managing Populations Where Males Have Long Careers 242

14.3 Species Considerations for Conservation Breeding 244

14.3.1 Sheep and Goats 244

14.3.2 Swine 246

14.3.3 Rabbits 246

14.3.4 Poultry 246

14.3.5 Horses and Donkeys 247

14.3.6 Dogs 248

14.4 Rotational Breeding or Spiral Breeding 248

14.5 Poultry Plans (except Geese!) 252

14.5.1 The Felch Method 255

14.5.2 Sequential Rotation of Male Poultry 257

14.5.3 Only Two Lines Available: Poultry, Swine, and Rabbits 257

14.5.4 "Double Mating" of Poultry 257

14.6 Trio Breeding Plan for Rabbits and Others 258

15 Rescuing Small Populations: General Aspects 261

15.1 General Guiding Principles 263

15.2 Subdivision of Populations 267

15.3 Species-Specific Considerations 268

16 Specific Plans for Rescue Breeding 270

16.1 One Male, Several Females 271

16.1.1 Jericho Goats 275

16.2 One Male, Several Females, Some Inbreeding Depression 277

16.2.1 Palmer-Dunn Pineywoods Cattle 280

16.3 Multiple Males, Multiple Females, All Variably Inbred 281

16.3.1 Randall Lineback Cattle 283

16.4 One Male, Multiple Herds of Females 285

16.4.1 Criollo Macabeo Cattle 287

16.5 One Large Herd with Satellite Populations 288

16.5.1 Marsh Tacky Horses 290

16.6 Breeds with Multiple Rare Bloodlines 291

16.6.1 Choctaw/Cherokee/Huasteca Horses 291

16.6.2 Rare Strain Pineywoods Cattle 293

16.6.3 Java Chickens 294

16.7 Too Few Animals for Stand-Alone Conservation 297

16.7.1 Eggerton Myotonic Goats 298

16.8 Single Animal of Conservation Interest 298

16.8.1 Glendhu Leicester Longwool Sheep 300

16.9 Frozen Semen Available from Historic Stores 302

16.9.1 Shorthorn Cattle 302

16.10 Managing a Genetic Defect 304

16.10.1 Akhal-Teke Naked Foal Syndrome 304

17 Putting the Lessons Together: Dexter Cattle 306

18 External Factors Affecting Breeds 315

18.1 Market Demand 315

18.2 Crossbreeding 320

18.3 Regulations 322

18.4 Imports 324

18.4.1 Imports That Contribute Substantially to Conservation Efforts 325

18.4.2 Imports That Enhance American Bloodlines 329

18.4.3 Imports That Hamper Conservation in the Country of Origin 329

18.4.4 Imports That Endanger American Bloodlines and Breeds 329

18.4.5 Assessment of Importations 336

19 General Principles for Breed Associations 337

19.1 Purposes of Associations 339

19.2 Membership 340

19.3 Breed Associations for Endangered Breeds 341

19.4 Communication 341

19.5 Multiple Breed Associations 343

19.6 Codes of Ethics 346

19.7 Educational Programs 346

19.8 Research 347

19.9 Recruiting and Training New Breeders 348

19.10 Breed Promotion 350

19.11 Breed Sale Events 351

19.12 Assuring Continuity 352

20 Practical Details of Breed Associations 354

20.1 Forms of Association 354

20.1.1 Private Associations 354

20.1.2 Unincorporated Associations 356

20.1.3 Incorporated Associations 357

20.2 Bylaws 358

20.3 Board of Directors 359

20.3.1 Directors and Officers 360

20.4 Networks of Breed Associations 360

20.5 Promoting the Association 362

20.6 Association Responsibilities 362

20.6.1 Conservation Responsibilities 363

20.6.2 Reporting Pedigree Information 363

20.6.3 Reporting Breed Health Status 365

20.6.4 Reporting Measures of Genetic Diversity 365

20.6.5 Programs to Save Herds in Peril 365

20.6.6 Development of Long-Range Conservation Plans 366

20.6.7 Dispelling False Rumors Quickly 367

20.7 Conflict of Interest 367

20.8 Local and Regional Groups 368

21 Registry 369

21.1 Registration 369

21.2 Pedigrees 370

21.3 Pedigree Recording Systems 373

21.4 Litter Recording 374

21.5 Stud Reports 375

21.6 Selective Recording Systems 375

21.7 Registrations Are Important 376

21.8 Closed Herd Book Registries 377

21.9 Open Herd Book Registries 379

21.10 Registration of Crossbreds and Paxtbreds 381

21.11 Registration for Extensively Raised Landraces 383

21.12 Starting a Registry 384

22 Breeder Responsibilities 386

22.1 Master Breeders 388

22.2 Breeds, Breeders, Associations, and the Future 392

Appendices

Appendix 1 Phenotypic Matrix for Colonial Spanish Horses 394

Appendix 2 A Protocol for Bloodline Analysis 397

Appendix 3 A Protocol for Assessing Popular Sires or Dams 399

Appendix 4 Sample Bylaws 401

Index 408

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